Resources
Database Credentialed Access
EHR-DS-QA: A Synthetic QA Dataset Derived from Medical Discharge Summaries for Enhanced Medical Information Retrieval Systems
Konstantin Kotschenreuther
mimic-iv large language models clinical question-answering medical discharge summaries
Published: Jan. 11, 2024. Version: 1.0.0
Database Credentialed Access
DrugEHRQA: A Question Answering Dataset on Structured and Unstructured Electronic Health Records For Medicine Related Queries
Jayetri Bardhan, Anthony Colas, Kirk Roberts, Daisy Zhe Wang
Published: April 12, 2022. Version: 1.0.0
Database Credentialed Access
Annotation dataset of social determinants of health from MIMIC-III Clinical Care Database
Marco Guevara, Shan Chen, Spencer Thomas, Danielle Bitterman
natural language processing social determinants of health
Published: Jan. 24, 2024. Version: 1.0.1
Database Credentialed Access
EHRNoteQA: A Patient-Specific Question Answering Benchmark for Evaluating Large Language Models in Clinical Settings
Sunjun Kweon, Jiyoun Kim, Heeyoung Kwak, Dongchul Cha, Hangyul Yoon, Kwang Hyun Kim, Seunghyun Won, Edward Choi
Published: April 3, 2024. Version: 1.0.0
Database Credentialed Access
ODD: A Benchmark Dataset for the NLP-based Opioid Related Aberrant Behavior Detection
Sunjae Kwon, Xun Wang, Weisong Liu, Emily Druhl, Minhee Sung, Joel Reisman, Wenjun Li, Robert Kerns, William Becker, Hong Yu
natural language processing substance use opioid related aberrant behavior
Published: Jan. 11, 2024. Version: 1.0.0
Database Credentialed Access
Annotation dataset of problematic opioid use and related contexts from MIMIC-III Critical Care Database discharge summaries
Melissa Poulsen, Vanessa Troiani, Philip Freda, Danielle Mowery, Anahita Davoudi
natural language processing opioid use disorder clinical notes substance use
Published: Feb. 8, 2023. Version: 1.0.0
Database Credentialed Access
Tasks 1 and 3 from Progress Note Understanding Suite of Tasks: SOAP Note Tagging and Problem List Summarization
Yanjun Gao, John Caskey, Timothy Miller, Brihat Sharma, Matthew Churpek, Dmitriy Dligach, Majid Afshar
Published: Sept. 30, 2022. Version: 1.0.0
Database Credentialed Access
Learning to Ask Like a Physician: a Discharge Summary Clinical Questions (DiSCQ) Dataset
Eric Lehman
machine learning question generation question answering
Published: July 28, 2022. Version: 1.0
Database Credentialed Access
MIMIC-III and eICU-CRD: Feature Representation by FIDDLE Preprocessing
Shengpu Tang, Parmida Davarmanesh, Yanmeng Song, Danai Koutra, Michael Sjoding, Jenna Wiens
preprocessing machine learning electronic health record
Published: April 28, 2021. Version: 1.0.0
Database Credentialed Access
National Institutes of Health Stroke Scale (NIHSS) Annotations for the MIMIC-III Database
Jiayang Wang, Xiaoshuo Huang, Lin Yang, Jiao Li
Published: Jan. 25, 2021. Version: 1.0.0